STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0167Putative protease. (623 aa)    
Predicted Functional Partners:
THII_1552
Hypothetical protein.
 
  
0.644
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.618
THII_2208
Polyketide synthase.
     
 0.595
THII_1605
ABC transporter.
 
  
 0.575
THII_0816
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.561
THII_3832
Hypothetical protein.
  
 
 0.528
THII_1040
Metalloprotease; Extracellular zinc metalloprotease.
 
  
 0.504
THII_0643
Elastase; Extracellular zinc metalloprotease.
 
  
 0.503
THII_0347
Peptidase S8/S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
 
  
 0.479
THII_0049
Secretion protein HlyD.
 
  
 0.474
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.