STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0190Apoptotic protease activating factor 1. (618 aa)    
Predicted Functional Partners:
THII_0511
Na-Ca exchanger/integrin-beta4.
  
     0.723
THII_3045
Hypothetical protein.
  
     0.723
THII_2126
Hypothetical protein.
  
     0.705
THII_3283
PDK repeat-containing protein.
  
     0.689
THII_0189
Signal transduction histidine kinase.
 
     0.686
THII_3139
Serine/threonine protein kinase with WD40 repeats.
 
     0.680
THII_1506
Hypothetical protein.
  
     0.679
THII_2524
Sulfotransferase family protein.
  
     0.667
THII_3477
Peptidase domain-containing protein.
  
     0.650
THII_0260
Conserved repeat protein.
  
     0.647
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.