STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0199DNA internalization-related competence protein ComEC/Rec2. (764 aa)    
Predicted Functional Partners:
THII_2428
DNA processing chain A.
 
  
 0.887
THII_1461
Putative amidophosphoribosyltransferase.
 
  
 0.882
THII_2294
PAS domain S-box.
  
  
 0.800
THII_1980
Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.739
THII_0198
Flagellar biosynthesis protein FlhF.
       0.664
THII_0220
Transporter.
  
  
 0.640
THII_1957
DNA segregation ATPase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
 
  
 0.623
THII_1158
Mg chelatase family protein.
 
  
 0.619
THII_3049
DNA polymerase III subunit delta.
 
   
 0.613
THII_0167
Putative protease.
 
  
 0.608
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.