STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0223Outer membrane cobalamin receptor protein. (590 aa)    
Predicted Functional Partners:
THII_2092
TonB protein.
 
 
 
 0.760
THII_0651
TonB family protein.
 
 
 
 0.531
THII_1162
TonB family protein.
   
 
 0.526
THII_0097
NHL repeat containing protein.
   
 
 0.452
THII_3343
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.441
THII_1428
Biopolymer transport protein ExbD/TolR family.
 
   
 0.425
THII_2499
Hypothetical protein.
   
 
 0.415
THII_3964
glucosyltransferase-I precursor.
   
 
 0.415
THII_1429
MotA/TolQ/ExbB proton channel family protein.
 
   
 0.413
THII_1878
Surface antigen.
  
     0.404
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.