Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THII_0230Cytochrome P450. (458 aa)    
Predicted Functional Partners:
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
 
 0.982
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.980
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.936
THII_2208
Polyketide synthase.
 
 0.879
THII_2783
tubC protein.
 
 0.866
THII_2209
Polyketide synthase.
 
 
 0.823
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
 0.743
THII_0012
Polyketide synthase family protein.
 
 
 0.739
THII_2133
Hypothetical protein.
 
 
 0.729
THII_2996
WD repeat-containing protein.
  
 
 0.715
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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