STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0231MarR family transcriptional regulator. (177 aa)    
Predicted Functional Partners:
THII_0232
Hypothetical protein.
       0.773
THII_0233
FAD dependent oxidoreductase.
       0.773
THII_0234
Aminotransferase, class III.
       0.675
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.606
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.563
THII_0230
Cytochrome P450.
     
 0.559
THII_0636
Signal transduction histidine kinase.
  
  
 0.533
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
  
 0.496
THII_3728
Glutamate synthase.
      
 0.493
THII_1954
Signal transduction histidine kinase.
 
  
 0.484
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.