STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_02522Fe-2S ferredoxin. (107 aa)    
Predicted Functional Partners:
THII_1524
NADP oxidoreductase.
 
 
 0.916
THII_0523
NADH-quinone oxidoreductase subunit E.
 
 
 0.854
THII_0253
Hypothetical protein.
       0.793
THII_2946
NADH-quinone oxidoreductase subunit M.
  
    0.783
THII_0778
Pyridine nucleotide-disulfide oxidoreductase family.
   
 
 0.710
THII_0619
Protein involved in sulfur oxidation DsrL.
   
 
 0.705
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
   
 
 0.705
THII_0254
Hypothetical protein.
       0.678
THII_3058
Glutamate synthase.
   
 
 0.646
THII_1523
Hydrogen dehydrogenase.
 
 
 
 0.608
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.