Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_0257Glutamine synthetase, type I. (469 aa)    
Predicted Functional Partners:
THII_3728
Glutamate synthase.
  
 
 0.966
THII_1808
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
   
 
 0.959
THII_3058
Glutamate synthase.
  
 
 0.949
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 0.937
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.932
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
 
 0.927
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
 
 0.922
THII_1781
Nitrite reductase [NAD(P)H], small subunit.
   
 
 0.920
THII_1807
Nitrogenase molybdenum-iron protein alpha chain.
   
 
 0.918
THII_1782
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.915
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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