Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THII_0275 | THII_0276 | Hypothetical protein. | Clostripain. | 0.601 |
THII_0275 | THII_0277 | Hypothetical protein. | Hypothetical protein. | 0.464 |
THII_0276 | THII_0275 | Clostripain. | Hypothetical protein. | 0.601 |
THII_0276 | THII_0277 | Clostripain. | Hypothetical protein. | 0.602 |
THII_0277 | THII_0275 | Hypothetical protein. | Hypothetical protein. | 0.464 |
THII_0277 | THII_0276 | Hypothetical protein. | Clostripain. | 0.602 |
THII_0277 | THII_0278 | Hypothetical protein. | Hypothetical protein. | 0.443 |
THII_0277 | THII_0279 | Hypothetical protein. | Hypothetical protein. | 0.406 |
THII_0277 | THII_0803 | Hypothetical protein. | Histidine kinase. | 0.560 |
THII_0277 | THII_0823 | Hypothetical protein. | Patatin. | 0.476 |
THII_0277 | THII_1949 | Hypothetical protein. | Signal transduction histidine kinase. | 0.432 |
THII_0277 | THII_2781 | Hypothetical protein. | Arylsulfatase. | 0.438 |
THII_0277 | THII_3486 | Hypothetical protein. | Peptidase M1 family protein. | 0.481 |
THII_0277 | THII_3638 | Hypothetical protein. | Hypothetical protein. | 0.456 |
THII_0278 | THII_0277 | Hypothetical protein. | Hypothetical protein. | 0.443 |
THII_0278 | THII_0279 | Hypothetical protein. | Hypothetical protein. | 0.697 |
THII_0279 | THII_0277 | Hypothetical protein. | Hypothetical protein. | 0.406 |
THII_0279 | THII_0278 | Hypothetical protein. | Hypothetical protein. | 0.697 |
THII_0803 | THII_0277 | Histidine kinase. | Hypothetical protein. | 0.560 |
THII_0803 | THII_1949 | Histidine kinase. | Signal transduction histidine kinase. | 0.458 |
page 1 of 2