Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THII_0335Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family. (466 aa)    
Predicted Functional Partners:
THII_0334
Nitric-oxide reductase.
 
 0.999
THII_2875
Nitrite reductase.
 
 0.998
THII_2884
Nitrous oxide reductase.
  
 
 0.993
THII_0339
Von Willebrand factor type A.
 
  
 0.951
THII_0336
ATPase AAA.
 
  
 0.917
THII_2876
C-type cytochrome c55x.
 
 
 0.903
THII_2888
Copper ABC transporter substrate-binding protein.
  
  
 0.899
THII_0338
Iron-sulfur cluster-binding protein.
 
  
 0.881
THII_2877
Cytochrome d1 heme subunit.
 
 
 0.881
THII_0363
Nitric oxide reductase activation protein.
 
  
 0.820
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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