STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0353N-carbamoylputrescine amidase. (291 aa)    
Predicted Functional Partners:
THII_0351
Peptidylarginine deiminase; Belongs to the agmatine deiminase family.
 
 0.999
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
 
 0.953
THII_3051
Putative spermidine synthase with an N-terminal membrane domain.
  
 
 0.924
THII_0352
Restriction endonuclease.
       0.714
THII_1200
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
   
0.474
THII_2208
Polyketide synthase.
  
 
 0.474
THII_0350
Multi-sensor hybrid histidine kinase.
     
 0.466
THII_1691
Flavoprotein subunit of flavocytochrome c sulfide dehydrogenase.
   
  
 0.459
THII_0354
Two-component hybrid sensor and regulator.
       0.449
purL
Phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.439
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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