Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THII_0384ABC-type Mn2+/Zn2+ transport system, permease component. (280 aa)    
Predicted Functional Partners:
znuC
Zinc ABC transporter ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.999
THII_0382
ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
 
 0.994
THII_0385
Hypothetical protein.
       0.561
THII_0386
Calcium-transporting ATPase 8, plasma membrane-type.
     
 0.542
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.498
THII_1390
Peptide ABC transporter substrate-binding protein.
     
 0.497
THII_3321
Phosphate ABC transporter permease.
      
 0.487
THII_1255
ABC transporter ATP-binding protein.
 
   
 0.462
THII_1897
Glycine betaine/proline transport system permease protein.
     
 0.419
THII_0767
Putative permease.
     
 0.408
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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