Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THII_0421Metal dependent phosphohydrolase. (550 aa)    
Predicted Functional Partners:
THII_3622
Adenylate/guanylate cyclase.
 
  
 0.809
THII_2963
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.772
THII_3768
Diguanylate cyclase/phosphodiesterase.
 
 
 
 0.763
THII_1913
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.760
THII_3889
Sensor histidine kinase FexB.
 
 
 0.740
THII_2053
Diguanylate cyclase with PAS/PAC and GAF sensors.
 
 
 0.732
THII_1021
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
 0.705
THII_1364
Sensor diguanylate cyclase/phosphodiesterase, GAF and PAS domain-containing.
 
 
 
 0.705
THII_2353
Transmembrane sensor domain-containing protein.
 
  
 0.696
THII_2976
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.680
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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