Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0469Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein. (705 aa)    
Predicted Functional Partners:
THII_0472
(2Fe-2S)-binding protein.
 
 0.999
THII_0471
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.954
THII_0470
MobA-like protein.
 
   
 0.944
THII_3111
Cytochrome c.
  
 0.936
THII_0195
(2Fe-2S)-binding protein.
 
     0.483
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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