STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0528Hypothetical protein. (832 aa)    
Predicted Functional Partners:
THII_0013
Hypothetical protein.
  
   0.670
THII_3045
Hypothetical protein.
  
    0.528
THII_0429
Hypothetical protein.
  
     0.511
THII_0276
Clostripain.
 
    0.505
THII_3915
NupC family protein.
  
    0.468
THII_0527
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
       0.466
THII_2379
Hypothetical protein.
  
     0.463
THII_1098
ABC transporter ATP-binding protein.
 
  
 0.450
THII_1049
Hypothetical protein.
  
 
 0.443
THII_0199
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.428
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.