Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0543Hypothetical protein. (477 aa)    
Predicted Functional Partners:
THII_0544
Hypothetical protein.
  
 0.996
THII_0545
Hypothetical protein.
       0.752
THII_3354
Ribonuclease T2; Belongs to the RNase T2 family.
  
     0.650
THII_0541
Family 3 adenylate cyclase.
       0.615
THII_0542
Family 3 adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
       0.615
THII_0540
Response regulator receiver protein.
       0.546
THII_1879
Hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.415
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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