Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0555Response regulator receiver protein. (122 aa)    
Predicted Functional Partners:
THII_0554
CheA signal transduction histidine kinase.
 
  0.964
THII_2177
Chemotaxis protein histidine kinase CheA.
   
  0.918
THII_2178
Fis family transcriptional regulator.
  
 
 
0.917
THII_2837
Chemotaxis protein CheC.
   
 
 0.914
THII_2838
Response regulator receiver.
    
  0.911
THII_0552
Methyl-accepting chemotaxis protein.
 
  0.876
THII_0553
CheW protein.
  
  0.849
THII_3345
Response regulator receiver protein.
  
 
   0.781
THII_0061
Hypothetical protein.
  
   0.774
THII_0802
Two-component response regulator.
  
 
   0.765
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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