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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0589General secretion pathway protein D. (635 aa)    
Predicted Functional Partners:
THII_0590
General secretion pathway protein C.
 
 
 0.950
THII_0854
General secretion pathway protein D.
  
  
 
0.928
THII_2261
General secretion pathway protein D.
  
  
 
0.927
THII_2843
General secretion pathway protein G.
  
 0.894
THII_1471
General secretion pathway protein J.
 
  
 0.831
THII_2481
General secretion pathway protein I.
 
  
 0.810
THII_0255
Type II secretory pathway, component PulK.
 
   
 0.798
THII_2700
Bacterial type II secretion system protein.
 
  
 0.795
THII_0856
General secretion pathway protein G.
 
  
 0.789
THII_2716
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.789
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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