STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0600ABC-type uncharacterized transport system, auxiliary component. (203 aa)    
Predicted Functional Partners:
THII_0599
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
   0.962
THII_2464
Hypothetical protein.
 
  
 0.637
THII_3173
Iron ABC transporter ATP-binding protein.
 
    0.633
THII_2437
Hypothetical protein.
  
     0.600
THII_0601
Hypothetical protein.
       0.511
THII_0602
Hypothetical protein.
       0.445
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.