Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
THII_0070 | THII_0331 | Signal transduction histidine kinase. | PAS domain S-box. | 0.992 |
THII_0070 | THII_0443 | Signal transduction histidine kinase. | Response regulator receiver protein. | 0.993 |
THII_0070 | THII_0636 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.993 |
THII_0070 | THII_0750 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.989 |
THII_0070 | THII_0774 | Signal transduction histidine kinase. | Sensory box histidine kinase/response regulator. | 0.992 |
THII_0070 | THII_0968 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.991 |
THII_0070 | THII_1949 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.971 |
THII_0070 | THII_2168 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.994 |
THII_0070 | THII_2294 | Signal transduction histidine kinase. | PAS domain S-box. | 0.994 |
THII_0070 | THII_3834 | Signal transduction histidine kinase. | Sensory transduction histidine kinase. | 0.993 |
THII_0331 | THII_0070 | PAS domain S-box. | Signal transduction histidine kinase. | 0.992 |
THII_0331 | THII_0443 | PAS domain S-box. | Response regulator receiver protein. | 0.994 |
THII_0331 | THII_0636 | PAS domain S-box. | Signal transduction histidine kinase. | 0.993 |
THII_0331 | THII_0750 | PAS domain S-box. | Signal transduction histidine kinase. | 0.993 |
THII_0331 | THII_0774 | PAS domain S-box. | Sensory box histidine kinase/response regulator. | 0.993 |
THII_0331 | THII_0968 | PAS domain S-box. | Signal transduction histidine kinase. | 0.992 |
THII_0331 | THII_1949 | PAS domain S-box. | Signal transduction histidine kinase. | 0.993 |
THII_0331 | THII_2168 | PAS domain S-box. | Signal transduction histidine kinase. | 0.995 |
THII_0331 | THII_2294 | PAS domain S-box. | PAS domain S-box. | 0.997 |
THII_0331 | THII_3834 | PAS domain S-box. | Sensory transduction histidine kinase. | 0.994 |
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