Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0637Hypothetical protein. (381 aa)    
Predicted Functional Partners:
THII_2641
Glycosyl transferase family protein.
 
     0.677
THII_1708
Glycosyl transferase.
  
     0.649
THII_2640
Glycosyl transferase group 1 family protein.
  
     0.638
THII_0597
Hypothetical protein.
 
  
 0.588
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.546
THII_1246
Group 1 glycosyl transferase.
  
  
 0.481
THII_2077
Glycosyl transferase family 1.
  
     0.452
THII_0636
Signal transduction histidine kinase.
     
 0.433
THII_3394
Glycosyl transferase, group 2 family protein.
  
    0.419
THII_0760
Glycosyltransferase, group 2 family protein.
  
  
 0.411
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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