Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THII_0674 | THII_0675 | THII_0674 | THII_0675 | AMP-dependent synthetase/ligase. | GNAT family acetyltransferase. | 0.773 |
THII_0674 | THII_0676 | THII_0674 | THII_0676 | AMP-dependent synthetase/ligase. | Hypothetical protein. | 0.664 |
THII_0674 | THII_0677 | THII_0674 | THII_0677 | AMP-dependent synthetase/ligase. | Orn/DAP/Arg decarboxylase 2. | 0.758 |
THII_0674 | THII_2208 | THII_0674 | THII_2208 | AMP-dependent synthetase/ligase. | Polyketide synthase. | 0.961 |
THII_0675 | THII_0674 | THII_0675 | THII_0674 | GNAT family acetyltransferase. | AMP-dependent synthetase/ligase. | 0.773 |
THII_0675 | THII_0676 | THII_0675 | THII_0676 | GNAT family acetyltransferase. | Hypothetical protein. | 0.482 |
THII_0675 | THII_0677 | THII_0675 | THII_0677 | GNAT family acetyltransferase. | Orn/DAP/Arg decarboxylase 2. | 0.509 |
THII_0676 | THII_0674 | THII_0676 | THII_0674 | Hypothetical protein. | AMP-dependent synthetase/ligase. | 0.664 |
THII_0676 | THII_0675 | THII_0676 | THII_0675 | Hypothetical protein. | GNAT family acetyltransferase. | 0.482 |
THII_0676 | THII_0677 | THII_0676 | THII_0677 | Hypothetical protein. | Orn/DAP/Arg decarboxylase 2. | 0.750 |
THII_0676 | THII_2208 | THII_0676 | THII_2208 | Hypothetical protein. | Polyketide synthase. | 0.791 |
THII_0677 | THII_0674 | THII_0677 | THII_0674 | Orn/DAP/Arg decarboxylase 2. | AMP-dependent synthetase/ligase. | 0.758 |
THII_0677 | THII_0675 | THII_0677 | THII_0675 | Orn/DAP/Arg decarboxylase 2. | GNAT family acetyltransferase. | 0.509 |
THII_0677 | THII_0676 | THII_0677 | THII_0676 | Orn/DAP/Arg decarboxylase 2. | Hypothetical protein. | 0.750 |
THII_0677 | THII_2208 | THII_0677 | THII_2208 | Orn/DAP/Arg decarboxylase 2. | Polyketide synthase. | 0.503 |
THII_0677 | asd | THII_0677 | THII_1032 | Orn/DAP/Arg decarboxylase 2. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.505 |
THII_0677 | dapA | THII_0677 | THII_0095 | Orn/DAP/Arg decarboxylase 2. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.772 |
THII_0677 | dapB | THII_0677 | THII_1909 | Orn/DAP/Arg decarboxylase 2. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.607 |
THII_0677 | dapF | THII_0677 | THII_0209 | Orn/DAP/Arg decarboxylase 2. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.937 |
THII_0677 | lysA | THII_0677 | THII_3716 | Orn/DAP/Arg decarboxylase 2. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.924 |
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