Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0715Teichoic acids export ATP-binding protein TagH. (244 aa)    
Predicted Functional Partners:
THII_0192
ABC-type polysaccharide/polyol phosphate export system, permease component.
 
 0.994
THII_1866
ABC-transporter protein.
 
 0.994
THII_0717
Putative glycosyltransferase.
 
  
 0.918
THII_0213
ABC transporter ATP-binding protein.
  
  
 
0.912
THII_0716
Putative glycosyltransferase.
 
  
 0.896
THII_1658
Glycosyl transferase.
 
  
 0.667
THII_0799
Protein involved in polysaccharide export.
  
  
 0.639
THII_1326
Capsular polysaccharide export protein.
  
  
 0.639
THII_0718
Hypothetical protein.
       0.608
THII_1461
Putative amidophosphoribosyltransferase.
   
    0.557
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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