Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THII_0735Sulfotransferase. (254 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
 
 
 0.862
THII_0734
Glycosyl transferase family protein.
   
   0.778
THII_0733
Hypothetical protein.
       0.773
THII_2639
Glycosyl transferase group 2 family protein.
  
 
 0.643
THII_0737
dTDP-glucose 4,6-dehydratase.
   
   0.634
THII_0736
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.620
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
   
 0.555
THII_1704
Sulfotransferase.
  
 
   0.538
THII_2154
Hypothetical protein.
 
     0.518
THII_3486
Peptidase M1 family protein.
  
 
 0.505
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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