STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0741Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (360 aa)    
Predicted Functional Partners:
THII_0743
Oxidoreductase domain protein.
  
 0.904
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.767
THII_3119
Polysaccharide biosynthesis protein CapD.
 
  
 0.732
THII_3176
Acetyltransferase.
  
 0.724
THII_0742
Hypothetical protein.
       0.668
THII_3203
Hypothetical protein.
  
 0.666
THII_0740
Formyl transferase.
  
  
 0.652
THII_3100
Acetyltransferase.
   0.555
THII_0739
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.543
THII_0737
dTDP-glucose 4,6-dehydratase.
  
 0.508
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.