Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0772Transglutaminase domain-containing protein. (658 aa)    
Predicted Functional Partners:
THII_0773
Hypothetical protein.
  
 0.991
THII_3930
Type IV pilus assembly protein PilO.
  
     0.757
THII_2427
Peptidoglycan-binding LysM.
  
     0.756
THII_2180
Tfp pilus assembly protein PilZ.
 
     0.750
THII_3931
Type IV pilus assembly protein PilP.
  
     0.742
THII_3929
Type IV pilus assembly protein PilN.
  
     0.735
THII_3932
Type IV pilus assembly protein PilP.
  
     0.733
THII_3928
Type IV pilus assembly protein PilM.
  
     0.722
THII_2529
Methanol dehydrogenase regulatory protein MoxR.
 
   
 0.713
THII_3513
Membrane-bound lytic murein transglycosylase B.
      0.710
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: high (84%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.