Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0802Two-component response regulator. (141 aa)    
Predicted Functional Partners:
THII_0803
Histidine kinase.
 
 
   0.910
THII_0636
Signal transduction histidine kinase.
  
 
 0.776
THII_0801
PilT protein domain-containing protein.
       0.773
THII_0555
Response regulator receiver protein.
  
 
   0.765
THII_2085
Chemotaxis protein CheY.
  
 
   0.755
THII_3345
Response regulator receiver protein.
  
   0.755
THII_1036
Signal transduction histidine kinase.
  
 
 0.750
THII_0878
Response regulator receiver.
  
     0.745
THII_1984
Chemotaxis protein CheY.
  
 
   0.743
THII_1287
Chemotaxis protein CheY.
  
 
   0.735
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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