Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0803Histidine kinase. (397 aa)    
Predicted Functional Partners:
THII_0802
Two-component response regulator.
 
 
   0.910
THII_0801
PilT protein domain-containing protein.
       0.773
THII_3042
Two-component sensor serine/threonine kinase.
  
 
 0.732
THII_3781
Carboxyl-terminal protease family protein; Belongs to the peptidase S41A family.
  
 
 
 0.675
THII_0555
Response regulator receiver protein.
  
   0.655
THII_3902
Response regulator receiver protein.
  
   0.655
THII_0967
Two-component response regulator.
 
 
 0.649
THII_2972
Histidine kinase.
  
 
   0.641
THII_2168
Signal transduction histidine kinase.
 
 
0.636
THII_0277
Hypothetical protein.
    
 
 0.630
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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