STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0807Exodeoxyribonuclease I. (487 aa)    
Predicted Functional Partners:
THII_1329
Single-strand DNA binding protein.
    
 
 0.583
THII_2906
Hypothetical protein.
  
     0.570
THII_0274
Two-component system sensor histidine kinase/response regulator.
  
     0.532
THII_1573
Two-component system sensor histidine kinase/response regulator.
  
     0.505
THII_0560
MscS Mechanosensitive ion channel.
  
     0.467
THII_0071
Hemolysin activation/secretion protein.
  
     0.466
THII_1245
single-stranded-DNA-specific exonuclease RecJ.
    
 
 0.452
THII_3348
MscS Mechanosensitive ion channel.
  
     0.443
THII_1931
Hypothetical protein.
  
     0.442
THII_0905
Subtilisin-like serine protease.
  
     0.404
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.