Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0816Hypothetical protein; Belongs to the UPF0276 family. (280 aa)    
Predicted Functional Partners:
THII_0815
Hypothetical protein.
 
  
 0.993
THII_0817
Hypothetical protein.
 
  
 0.944
THII_0276
Clostripain.
   
    0.648
THII_0386
Calcium-transporting ATPase 8, plasma membrane-type.
   
    0.644
THII_0167
Putative protease.
   
    0.561
THII_0260
Conserved repeat protein.
   
    0.561
THII_0745
Hypothetical protein.
   
    0.561
THII_0814
ADP-ribose pyrophosphatase.
       0.497
THII_1552
Hypothetical protein.
   
    0.445
THII_0911
Hypothetical protein.
  
     0.408
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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