STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0829Lipopolysaccharide core biosynthesis glycosyltransferase. (259 aa)    
Predicted Functional Partners:
THII_0830
Two-domain glycosyltransferase.
     0.988
THII_0988
Lipid A core-O-antigen ligase-like enzyme.
  
 0.765
THII_2638
Glycosyl transferase family protein.
     0.712
THII_3489
Lipopolysaccharide heptosyltransferase.
 
  
 0.634
lpxK
tetraacyldisaccharide-1-P 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
   
 0.605
THII_0106
Glycosyl transferase, family 9.
 
  
 0.468
THII_0182
Glycosyl transferase, group 2 family protein.
     0.443
THII_0828
Hypothetical protein.
       0.432
THII_1709
Glycosyl transferase group 1.
  
 0.429
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.