Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_0838Polyhydroxyalkonate synthesis repressor, PhaR. (168 aa)    
Predicted Functional Partners:
THII_0837
acetoacetyl-CoA reductase.
 
   
 0.831
THII_1299
poly(R)-hydroxyalkanoic acid synthase.
 
   
 0.804
THII_1233
Polyhydroxyalkanoic acid synthase.
 
   
 0.797
THII_0839
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.718
THII_1228
poly(R)-hydroxyalkanoic acid synthase subunit PhaE.
 
   
 0.709
THII_1596
Hypothetical protein.
 
      0.653
THII_3050
Hypothetical protein.
 
     0.517
THII_0836
Phasin family protein.
     
 0.459
THII_0432
Succinate dehydrogenase membrane anchor subunit.
  
     0.450
THII_1281
Phosphotransacetylase.
  
   
 0.432
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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