STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0854General secretion pathway protein D. (713 aa)    
Predicted Functional Partners:
THII_2261
General secretion pathway protein D.
  
  
 
0.929
THII_0589
General secretion pathway protein D.
  
  
 
0.928
THII_0856
General secretion pathway protein G.
 
  
 0.831
THII_0590
General secretion pathway protein C.
 
 
 0.817
THII_2700
Bacterial type II secretion system protein.
 
  
 0.769
THII_2843
General secretion pathway protein G.
  
 0.714
THII_0855
Hypothetical protein.
       0.642
tolR
Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.604
THII_2520
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.568
THII_1721
Type II secretion system protein.
 
  
 0.561
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.