STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0859Secreted protein. (218 aa)    
Predicted Functional Partners:
THII_1471
General secretion pathway protein J.
     
  0.900
THII_0856
General secretion pathway protein G.
  
 
 0.736
THII_0858
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 
 0.721
THII_1272
General secretory pathway protein K.
  
 
 0.675
THII_0255
Type II secretory pathway, component PulK.
  
 
 0.647
THII_0857
General secretion pathway protein H.
     
 0.641
THII_1043
Hypothetical protein.
  
 
 0.640
THII_2700
Bacterial type II secretion system protein.
  
 
 0.404
THII_2843
General secretion pathway protein G.
  
 
 0.404
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.