STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0872WD40 repeat-containing protein. (1206 aa)    
Predicted Functional Partners:
THII_0873
Extracellular ligand-binding receptor.
       0.777
THII_1822
WD repeat-containing protein.
  
     0.578
THII_0012
Polyketide synthase family protein.
 
 
   0.544
THII_0874
Hypothetical protein.
       0.539
THII_0011
Hypothetical protein.
  
     0.497
THII_0964
TPR repeat containing protein.
  
 
 0.488
THII_1006
Hypothetical protein.
  
 
  0.476
THII_0010
ASPIC/UnbV domain-containing protein.
  
     0.465
THII_0879
ABC transporter ATP-binding protein.
  
     0.455
THII_2996
WD repeat-containing protein.
  
 
 
0.455
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.