STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0879ABC transporter ATP-binding protein. (390 aa)    
Predicted Functional Partners:
THII_3420
ABC transporter ATP-binding protein, putative.
 
     0.812
THII_0535
Sigma-70 region 4 domain-containing protein.
  
     0.768
THII_0276
Clostripain.
  
     0.748
THII_1879
Hypothetical protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
     0.710
THII_0905
Subtilisin-like serine protease.
  
     0.662
THII_0692
Hypothetical protein.
  
     0.656
THII_3384
Mannonate dehydratase.
  
     0.645
THII_3405
Hypothetical protein.
  
     0.616
THII_0899
ATPase AAA.
  
     0.592
THII_2951
Hypothetical protein.
  
     0.567
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.