STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0918ATPase. (393 aa)    
Predicted Functional Partners:
THII_1111
Hypothetical protein.
 
     0.779
THII_0085
Hypothetical protein.
  
     0.746
THII_2634
Hypothetical protein.
  
     0.705
THII_2330
Hypothetical protein.
  
     0.677
THII_3332
Putative transposase.
  
     0.478
THII_1095
Transposase.
  
     0.473
THII_2276
Transposase.
  
     0.462
THII_3172
Hypothetical protein.
  
     0.460
THII_3029
Hypothetical protein.
  
     0.417
THII_1059
Putative transposase.
  
     0.402
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.