STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0964TPR repeat containing protein. (1164 aa)    
Predicted Functional Partners:
THII_2996
WD repeat-containing protein.
 
 0.969
THII_1574
TIR domain-containing protein.
 
 0.663
THII_3678
Ankyrin.
  
 0.591
THII_2120
WD40 repeat-containing protein.
  0.568
THII_0453
Hypothetical protein.
  0.563
THII_2639
Glycosyl transferase group 2 family protein.
  
 
 0.563
THII_2778
WD40 repeat-containing protein, subgroup.
 
  0.558
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.557
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.550
THII_1693
Ankyrin.
  
 0.546
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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