STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0969Transglutaminase-like enzyme, predicted cysteine protease. (632 aa)    
Predicted Functional Partners:
THII_0970
Conserved repeat protein.
 
    0.914
THII_0971
moxR-1 methanol dehydrogenase regulatory protein.
 
  
 0.840
THII_0773
Hypothetical protein.
 
  
 0.716
THII_0968
Signal transduction histidine kinase.
 
     0.595
THII_2529
Methanol dehydrogenase regulatory protein MoxR.
 
  
 0.578
THII_2199
Transposase, IS1 family.
  
     0.513
THII_1001
IS1 transposase.
  
     0.512
THII_3157
Hypothetical protein.
  
  
 0.490
THII_2510
Membrane protease subunit, stomatin/prohibitin.
  
     0.479
THII_0260
Conserved repeat protein.
  
     0.440
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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