Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1007Outer membrane autotransporter barrel domain-containing protein. (948 aa)    
Predicted Functional Partners:
THII_1006
Hypothetical protein.
 
    0.832
THII_1008
Hypothetical protein.
       0.773
THII_1009
Hypothetical protein.
 
     0.678
THII_0318
Hypothetical protein.
  
     0.559
THII_1005
Hypothetical protein.
       0.501
THII_1004
Hypothetical protein.
       0.479
THII_0542
Family 3 adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
     0.451
THII_1010
Hypothetical protein.
 
     0.446
THII_1704
Sulfotransferase.
  
     0.428
THII_0745
Hypothetical protein.
 
 
 
 0.420
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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