STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1011T6SS protein Cts2B. (494 aa)    
Predicted Functional Partners:
THII_1010
Hypothetical protein.
 
 0.999
THII_1012
Hemolysin-coregulated protein.
 
 
 0.996
THII_1005
Hypothetical protein.
 
  
 0.965
THII_1014
Hypothetical protein.
 
  
 0.952
THII_1009
Hypothetical protein.
 
  
 0.935
THII_1015
Hypothetical protein.
 
  
 0.929
THII_1013
Hypothetical protein.
 
  
 0.928
THII_1003
Hypothetical protein.
 
  
 0.924
THII_1004
Hypothetical protein.
 
  
 0.912
THII_1016
Type VI secretion ATPase; Belongs to the ClpA/ClpB family.
 
 0.891
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.