STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1025Metallo-beta-lactamase family protein. (231 aa)    
Predicted Functional Partners:
THII_2988
Hydroxyacid dehydrogenase.
    
 0.907
THII_1691
Flavoprotein subunit of flavocytochrome c sulfide dehydrogenase.
   
 0.808
THII_1026
Folate-binding protein YgfZ; Belongs to the GcvT family.
       0.757
THII_2208
Polyketide synthase.
 
 
 
 0.742
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.715
THII_0012
Polyketide synthase family protein.
 
   
 0.669
THII_1802
Rhodanese-like protein.
 
 
 0.575
groS
Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
 
 0.572
THII_1943
Hydantoinase/oxoprolinase.
      
 0.487
THII_1024
Transcriptional regulator, SpoVT_AbrB family.
       0.477
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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