STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1045Type II secretion system protein. (138 aa)    
Predicted Functional Partners:
THII_0858
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
     
  0.900
THII_2481
General secretion pathway protein I.
     
  0.900
THII_1046
Protein containing Appr-1-p processing domain.
       0.773
THII_1047
Hypothetical protein.
       0.773
THII_1043
Hypothetical protein.
  
 
 0.682
THII_1044
Hypothetical protein.
       0.612
THII_1042
Hypothetical protein.
       0.549
THII_1041
Hypothetical protein.
       0.540
THII_1048
Hypothetical protein.
       0.440
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.