STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1100GCN5-related N-acetyltransferase. (896 aa)    
Predicted Functional Partners:
THII_1914
Deacetylase.
 
     0.635
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.607
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.599
THII_1281
Phosphotransacetylase.
  
  
 0.567
THII_2208
Polyketide synthase.
  
  
 0.558
THII_1050
Amino acid adenylation enzyme/thioester reductase family protein.
  
  
 0.536
THII_1954
Signal transduction histidine kinase.
  
 
 0.525
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.520
THII_2783
tubC protein.
  
  
 0.516
THII_0463
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase.
     
 0.492
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.