STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_1139Hypothetical protein. (475 aa)    
Predicted Functional Partners:
THII_1138
Radical SAM domain-containing protein.
  
    0.744
THII_1137
Hypothetical protein.
       0.737
THII_2638
Glycosyl transferase family protein.
 
     0.708
THII_2208
Polyketide synthase.
  
 
 0.694
THII_0182
Glycosyl transferase, group 2 family protein.
 
     0.648
THII_2978
Putative glycosyltransferase.
 
     0.646
THII_1701
Glycosyl transferase family protein.
  
     0.637
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.633
THII_1136
Hypothetical protein.
       0.631
THII_3394
Glycosyl transferase, group 2 family protein.
 
     0.609
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.