Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
THII_1229Putative site-specific integrase-resolvase. (124 aa)    
Predicted Functional Partners:
THII_0159
Site-specific integrase-resolvase.
 
     0.931
THII_1230
Putative site-specific integrase-resolvase.
 
     0.918
THII_0164
Resolvase-like protein.
  
     0.775
THII_1143
Resolvase.
  
     0.775
THII_1232
Transposase.
  
    0.662
THII_1228
poly(R)-hydroxyalkanoic acid synthase subunit PhaE.
       0.661
THII_1231
Transposase, IS605 OrfB family, central region.
       0.651
THII_1147
Transposase OrfB.
 
    0.640
THII_0160
Transposase IS605.
 
    0.613
THII_3453
HNH endonuclease.
  
     0.465
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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