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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1246Group 1 glycosyl transferase. (673 aa)    
Predicted Functional Partners:
THII_0760
Glycosyltransferase, group 2 family protein.
 
  
 0.657
THII_2208
Polyketide synthase.
  
 
 0.649
glgB
1,4-alpha-glucan-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.631
THII_2201
FkbH-like protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.589
THII_2641
Glycosyl transferase family protein.
 
  
 0.587
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.578
THII_1935
Putative glycosyltransferase.
 
  
 0.564
THII_3905
biotin-(acetyl-CoA carboxylase) ligase.
  
  
 0.545
THII_2123
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
  
 0.506
THII_2783
tubC protein.
   
 
 0.497
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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