STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1266Fe-S oxidoreductase. (363 aa)    
Predicted Functional Partners:
THII_1265
Methylase.
 
     0.841
THII_2880
Heme biosynthesis protein.
 
  
 0.573
THII_2881
AsnC family transcriptional regulator.
 
  
 0.567
THII_3502
Hypothetical protein.
  
     0.545
THII_2879
Protein nirL.
 
  
 0.527
THII_2878
Transcriptional regulator.
 
  
 0.521
THII_0276
Clostripain.
  
     0.517
THII_0535
Sigma-70 region 4 domain-containing protein.
  
     0.505
THII_2876
C-type cytochrome c55x.
 
    0.498
THII_2877
Cytochrome d1 heme subunit.
 
  
 0.494
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.