Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THII_1285Methyl-accepting chemotaxis protein. (674 aa)    
Predicted Functional Partners:
THII_1283
Chemotaxis protein histidine kinase-like protein.
 
 0.991
THII_1286
Chemotaxis signal transduction protein.
 
 0.985
THII_1288
Pilus response regulator PilG.
 
 0.984
THII_1287
Chemotaxis protein CheY.
 
  0.981
THII_2699
Pilus response regulator PilG.
  
  
  0.975
THII_1984
Chemotaxis protein CheY.
 
  0.953
THII_2085
Chemotaxis protein CheY.
 
  0.945
THII_1986
Chemotaxis signal transduction protein.
  
 0.941
THII_1988
Chemotaxis protein histidine kinase-like protein.
 
 
 0.934
THII_0554
CheA signal transduction histidine kinase.
 
 
 0.917
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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