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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_1299poly(R)-hydroxyalkanoic acid synthase. (581 aa)    
Predicted Functional Partners:
THII_0837
acetoacetyl-CoA reductase.
  
 
 0.970
THII_1228
poly(R)-hydroxyalkanoic acid synthase subunit PhaE.
 
  
 0.928
THII_1233
Polyhydroxyalkanoic acid synthase.
  
  
 
0.927
THII_1281
Phosphotransacetylase.
  
 0.906
THII_0838
Polyhydroxyalkonate synthesis repressor, PhaR.
 
   
 0.809
THII_2664
Alpha/beta hydrolase fold protein.
  
  
 0.701
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.683
THII_1300
Exoribonuclease R.
       0.568
THII_3050
Hypothetical protein.
 
     0.537
THII_1301
Signal transduction histidine kinase.
       0.519
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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